Bio7

The OpenSource application Bio7 is a software for ecological simulation models, image analysis and statistical analysis. Built upon the RCP framework of Eclipse it embeds several tools and programming languages for the analysis of complex ecological systems. Several Java based scripting languages (Groovy, BeanShell, Python/Jython, JavaScript, ImageJ Macro) and the Java language can be used from within Bio7 for the creation of simulation models and analysis tasks. In addition Bio7 also contains a complete "Graphical User Interface" (GUI) for the statistical software R (programming language) [1] and the scientific image analysis tool ImageJ [2] with special functions to send image data from ImageJ to R or R data to ImageJ.

Bio7
Stable release
3.2 / November, 2020
OSWindows, Linux, Macintosh
LicenseEclipse Public License
Websitehttp://bio7.org/

History

Development start: 2004
First release: 2007
Current release: November 2020

License

EPL (Eclipse Public License)

References
  1. Austenfeld, Marcel, und Wolfram Beyschlag. „A Graphical User Interface for R in a Rich Client Platform for Ecological Modeling". Journal of Statistical Software 49, Nr. 4 (2012): 1–19. (pdf)
  2. Austenfeld M, Beyschlag W: The Use of ImageJ within an Ecological Modeling Platform, ImageJ User and Developer Conference 2010, Luxembourg, Conference Proceedings, 211-216.
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