COPS4

COP9 signalosome complex subunit 4 is a protein that in humans is encoded by the COPS4 gene.[5][6]

COPS4
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 4D0P, 4D10, 4D18, 4WSN
Identifiers
Aliases	COPS4, CSN4, COP9 signalosome subunit 4, SGN4
External IDs	OMIM: 616008 MGI: 1349414 HomoloGene: 8067 GeneCards: COPS4
Gene location (Human) Chr. Chromosome 4 (human)[1] Band 4q21.22 Start 83,034,447 bp[1] End 83,075,818 bp[1]
Gene location (Mouse) Chr. Chromosome 5 (mouse)[2] Band 5 E4|5 48.49 cM Start 100,518,309 bp[2] End 100,547,803 bp[2]
RNA expression pattern More reference expression data
Gene ontology Molecular function • GO:0001948 protein binding • NEDD8-specific protease activity Cellular component • cytoplasm • COP9 signalosome • cell junction • synapse • extracellular exosome • cytoplasmic vesicle • synaptic vesicle • cell nucleus • nucleoplasm • cytosol • nuclear speck Biological process • transcription-coupled nucleotide-excision repair • nucleotide-excision repair, DNA damage recognition • protein deneddylation • post-translational modification Sources:Amigo / QuickGO
Orthologs
Species	Human	Mouse
Entrez	51138	26891
Ensembl	ENSG00000138663	ENSMUSG00000035297
UniProt	Q9BT78	O88544
RefSeq (mRNA)	NM_001258006 NM_016129 NM_001330727	NM_012001 NM_001359203 NM_001359204
RefSeq (protein)	NP_001244935 NP_001317656 NP_057213	NP_036131 NP_001346132 NP_001346133
Location (UCSC)	Chr 4: 83.03 – 83.08 Mb	Chr 5: 100.52 – 100.55 Mb
PubMed search	[3]	[4]
Wikidata
View/Edit Human View/Edit Mouse

This gene encodes one of eight subunits composing COP9 signalosome, a highly conserved protein complex that functions as an important regulator in multiple signaling pathways. The structure and function of COP9 signalosome is similar to that of the 19S regulatory particle of 26S proteasome. COP9 signalosome has been shown to interact with SCF-type E3 ubiquitin ligases and act as a positive regulator of E3 ubiquitin ligases.[6]

References

1. GRCh38: Ensembl release 89: ENSG00000138663 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000035297 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Wei N, Tsuge T, Serino G, Dohmae N, Takio K, Matsui M, Deng XW (Oct 1998). "The COP9 complex is conserved between plants and mammals and is related to the 26S proteasome regulatory complex". Curr Biol. 8 (16): 919–924. doi:10.1016/S0960-9822(07)00372-7. PMID 9707402. S2CID 13873982.
6. "Entrez Gene: COPS4 COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)".

External links

• Human COPS4 genome location and COPS4 gene details page in the UCSC Genome Browser.

Further reading

• Schwechheimer C, Deng XW (2001). "COP9 signalosome revisited: a novel mediator of protein degradation". Trends Cell Biol. 11 (10): 420–426. doi:10.1016/S0962-8924(01)02091-8. PMID 11567875.
• Wolf DA, Zhou C, Wee S (2004). "The COP9 signalosome: an assembly and maintenance platform for cullin ubiquitin ligases?". Nat. Cell Biol. 5 (12): 1029–1033. doi:10.1038/ncb1203-1029. PMID 14647295. S2CID 37458780.
• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–174. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–156. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
• Seeger M, Kraft R, Ferrell K, et al. (1998). "A novel protein complex involved in signal transduction possessing similarities to 26S proteasome subunits". FASEB J. 12 (6): 469–78. doi:10.1096/fasebj.12.6.469. PMID 9535219. S2CID 25424324.
• Sanger Centre, The; Washington University Genome Sequencing Cente, The (1999). "Toward a complete human genome sequence". Genome Res. 8 (11): 1097–108. doi:10.1101/gr.8.11.1097. PMID 9847074.
• Naumann M, Bech-Otschir D, Huang X, et al. (2000). "COP9 signalosome-directed c-Jun activation/stabilization is independent of JNK" (PDF). J. Biol. Chem. 274 (50): 35297–35300. doi:10.1074/jbc.274.50.35297. PMID 10585392. S2CID 27417298.
• Cohen H, Azriel A, Cohen T, et al. (2001). "Interaction between Interferon Consensus Sequence-binding protein and COP9/signalosome subunit CSN2 (Trip15). A possible link between interferon regulatory factor signaling and the COP9/signalosome". J. Biol. Chem. 275 (50): 39081–39089. doi:10.1074/jbc.M004900200. PMID 10991940.
• Tsuge T, Matsui M, Wei N (2001). "The subunit 1 of the COP9 signalosome suppresses gene expression through its N-terminal domain and incorporates into the complex through the PCI domain". J. Mol. Biol. 305 (1): 1–9. doi:10.1006/jmbi.2000.4288. PMID 11114242.
• Bech-Otschir D, Kraft R, Huang X, et al. (2001). "COP9 signalosome-specific phosphorylation targets p53 to degradation by the ubiquitin system". EMBO J. 20 (7): 1630–1639. doi:10.1093/emboj/20.7.1630. PMC 145508. PMID 11285227.
• Lyapina S, Cope G, Shevchenko A, et al. (2001). "Promotion of NEDD-CUL1 conjugate cleavage by COP9 signalosome". Science. 292 (5520): 1382–1385. doi:10.1126/science.1059780. PMID 11337588. S2CID 14224920.
• Peyrl A, Weitzdoerfer R, Gulesserian T, et al. (2003). "Aberrant expression of signaling-related proteins 14-3-3 gamma and RACK1 in fetal Down syndrome brain (trisomy 21)". Electrophoresis. 23 (1): 152–7. doi:10.1002/1522-2683(200201)23:1<152::AID-ELPS152>3.0.CO;2-T. PMID 11824616.
• Hoareau Alves K, Bochard V, Réty S, Jalinot P (2002). "Association of the mammalian proto-oncoprotein Int-6 with the three protein complexes eIF3, COP9 signalosome and 26S proteasome". FEBS Lett. 527 (1–3): 15–21. doi:10.1016/S0014-5793(02)03147-2. PMID 12220626. S2CID 39308598.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–16903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
• Serino G, Su H, Peng Z, et al. (2003). "Characterization of the last subunit of the Arabidopsis COP9 signalosome: implications for the overall structure and origin of the complex". Plant Cell. 15 (3): 719–731. doi:10.1105/tpc.009092. PMC 150025. PMID 12615944.
• Uhle S, Medalia O, Waldron R, et al. (2003). "Protein kinase CK2 and protein kinase D are associated with the COP9 signalosome". EMBO J. 22 (6): 1302–1312. doi:10.1093/emboj/cdg127. PMC 151059. PMID 12628923.
• Groisman R, Polanowska J, Kuraoka I, et al. (2003). "The ubiquitin ligase activity in the DDB2 and CSA complexes is differentially regulated by the COP9 signalosome in response to DNA damage". Cell. 113 (3): 357–367. doi:10.1016/S0092-8674(03)00316-7. PMID 12732143. S2CID 11639677.