ATG9A

Autophagy-related protein 9A is a protein that in humans is encoded by the ATG9A gene.[5]

ATG9A
Identifiers
Aliases	ATG9A, APG9L1, MGD3208, mATG9, autophagy related 9A
External IDs	OMIM: 612204 MGI: 2138446 HomoloGene: 34495 GeneCards: ATG9A
Gene location (Human) Chr. Chromosome 2 (human)[1] Band 2q35 Start 219,219,380 bp[1] End 219,229,717 bp[1]
Gene location (Mouse) Chr. Chromosome 1 (mouse)[2] Band 1|1 C4 Start 75,180,860 bp[2] End 75,192,196 bp[2]
RNA expression pattern More reference expression data
Gene ontology Molecular function • GO:0001948 protein binding Cellular component • integral component of membrane • recycling endosome • endosome • late endosome • Golgi apparatus • endoplasmic reticulum membrane • membrane • late endosome membrane • pre-autophagosomal structure • trans-Golgi network • autophagosome membrane • endoplasmic reticulum • cytoplasmic vesicle • autophagosome • intracellular membrane-bounded organelle • cytoplasmic vesicle membrane Biological process • protein localization to pre-autophagosomal structure • autophagosome assembly • autophagy • mitophagy • late nucleophagy • protein transport • response to nutrient levels • transport Sources:Amigo / QuickGO
Orthologs
Species	Human	Mouse
Entrez	79065	245860
Ensembl	ENSG00000198925	ENSMUSG00000033124
UniProt	Q7Z3C6	Q68FE2
RefSeq (mRNA)	NM_001077198 NM_024085	NM_001003917 NM_001288612 NM_001288613
RefSeq (protein)	NP_001070666 NP_076990 NP_001070666.1 NP_076990.4	NP_001003917 NP_001275541 NP_001275542
Location (UCSC)	Chr 2: 219.22 – 219.23 Mb	Chr 1: 75.18 – 75.19 Mb
PubMed search	[3]	[4]
Wikidata
View/Edit Human View/Edit Mouse

References

1. GRCh38: Ensembl release 89: ENSG00000198925 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000033124 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. "Entrez Gene: ATG9A ATG9 autophagy related 9 homolog A (S. cerevisiae)".

External links

• Human ATG9A genome location and ATG9A gene details page in the UCSC Genome Browser.

Further reading

• Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
• Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
• Suzuki Y, Yamashita R, Shirota M, et al. (2004). "Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions". Genome Res. 14 (9): 1711–8. doi:10.1101/gr.2435604. PMC 515316. PMID 15342556.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
• Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
• Yamada T, Carson AR, Caniggia I, et al. (2005). "Endothelial nitric-oxide synthase antisense (NOS3AS) gene encodes an autophagy-related protein (APG9-like2) highly expressed in trophoblast". J. Biol. Chem. 280 (18): 18283–90. doi:10.1074/jbc.M413957200. PMID 15755735.
• Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.
• Olsen JV, Blagoev B, Gnad F, et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983. S2CID 7827573.